analyze_gene_drug_response_asso: Analyze Association between Gene (Signature) and Drug...

Description Usage Arguments Value Examples

View source: R/analyze_gene_drug_response.R

Description

Analyze partial correlation of gene-drug association after controlling for tissue average expression.

Usage

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analyze_gene_drug_response_asso(gene_list, combine = FALSE)

Arguments

gene_list

a gene symbol list.

combine

if TRUE, combine the expression of gene list as a gene signature.

Value

a data.frame

Examples

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## Not run: 
analyze_gene_drug_response_asso("TP53")
analyze_gene_drug_response_asso(c("TP53", "KRAS"))
analyze_gene_drug_response_asso(c("TP53", "KRAS"), combine = TRUE)

# Visualization
vis_gene_drug_response_asso("TP53")

## End(Not run)

UCSCXenaShiny documentation built on Nov. 17, 2021, 9:06 a.m.