vcf_close: Close a VCF file previously opened with vcf_open.
In WhopGenome: High-Speed Processing of VCF, FASTA and Alignment Data
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
Closes the VCF file described by the given handle and prevents subsequent use.
Usage
1
vcf_close(vcf_filehandle)
Arguments
vcf_filehandle
A VCF filehandle returned by vcf_open
Details
Use .Call("VCF_close", vcf_filehandle ) to eliminate the overhead of using the R wrapper function.
Value
None
Author(s)
Ulrich Wittelsbuerger
See Also
vcf_open
Examples
1
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5
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7
8
9
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11
##
## Example:
##
vcffile <- system.file( "extdata" , "ex.vcf.gz" , package="WhopGenome" )
vcffile
vcffh <- vcf_open( vcffile )
vcffh
##
##
vcf_close( vcffh )
WhopGenome documentation built on May 1, 2019, 10:12 p.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
Closes the VCF file described by the given handle and prevents subsequent use.
Usage
1 | vcf_close(vcf_filehandle)
|
Arguments
vcf_filehandle |
A VCF filehandle returned by vcf_open |
Details
Use .Call("VCF_close", vcf_filehandle ) to eliminate the overhead of using the R wrapper function.
Value
None
Author(s)
Ulrich Wittelsbuerger
See Also
vcf_open
Examples
1 2 3 4 5 6 7 8 9 10 11 | ##
## Example:
##
vcffile <- system.file( "extdata" , "ex.vcf.gz" , package="WhopGenome" )
vcffile
vcffh <- vcf_open( vcffile )
vcffh
##
##
vcf_close( vcffh )
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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