vcf_getheaderline: Return one of the header lines of the VCF file
In WhopGenome: High-Speed Processing of VCF, FASTA and Alignment Data
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Return one of the header lines of the VCF file
Usage
1
vcf_getheaderline(vcff, whichnum)
Arguments
vcff
VCF file handle
whichnum
Number of header line to retrieve
Details
Use .Call("VCF_getHeaderLine", vcff, whichnum ) to eliminate the overhead of using the R wrapper function.
Value
A string containing the full header line.
Author(s)
Ulrich Wittelsbuerger
Examples
1
2
3
vcffile <- vcf_open( system.file( "extdata", "ex.vcf.gz" , package="WhopGenome") )
vcf_getheaderline( vcffile , as.integer(0) )
vcf_getheaderline( vcffile , as.integer(1) )
WhopGenome documentation built on May 1, 2019, 10:12 p.m.
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Description Usage Arguments Details Value Author(s) Examples
Description
Return one of the header lines of the VCF file
Usage
1 | vcf_getheaderline(vcff, whichnum)
|
Arguments
vcff |
VCF file handle |
whichnum |
Number of header line to retrieve |
Details
Use .Call("VCF_getHeaderLine", vcff, whichnum ) to eliminate the overhead of using the R wrapper function.
Value
A string containing the full header line.
Author(s)
Ulrich Wittelsbuerger
Examples
1 2 3 | vcffile <- vcf_open( system.file( "extdata", "ex.vcf.gz" , package="WhopGenome") )
vcf_getheaderline( vcffile , as.integer(0) )
vcf_getheaderline( vcffile , as.integer(1) )
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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