bedr
Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix'

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65
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bedr: Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix'
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API

API for bedr
Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix'

Global functions
%in.region% Man page
.onAttach Source code
`%in.region%` Source code
adjust.coordinates Man page Source code
bed2index Man page Source code
bed2vcf Man page Source code
bedr Man page Source code
bedr.join.multiple.region Man page Source code
bedr.join.region Man page Source code
bedr.merge.region Man page Source code
bedr.plot.region Man page Source code
bedr.setup Man page Source code
bedr.snm.region Man page Source code
bedr.sort.region Man page Source code
bedr.subtract.region Man page Source code
catv Man page Source code
check.binary Man page Source code
cluster.region Man page Source code
convert2bed Man page Source code
create.tmp.bed.file Man page Source code
determine.input Man page Source code
df2list Man page Source code
download.datasets Man page Source code
fill.vector Source code
fix.region Source code
flank.region Man page Source code
get.bedpe.id Man page Source code
get.chr.length Man page Source code
get.example.regions Man page Source code
get.fasta Man page Source code
get.random.regions Man page Source code
get.strand Man page Source code
grow.region Man page Source code
hash2vec Source code
in.region Man page Source code
index2bed Man page Source code
is.merged.region Man page Source code
is.sorted.region Man page Source code
is.valid.ref Man page Source code
is.valid.region Man page Source code
is.valid.seq Man page Source code
iterate.perm Source code
jaccard Man page Source code
modifyList2 Man page
order.region Man page Source code
permute.region Man page Source code
prep.vcf.header Source code
process.input Man page Source code
query.ucsc Man page Source code
read.vcf Man page Source code
reldist Man page Source code
sample.interval Source code
size.region Man page Source code
strsplit2matrix Man page Source code
tabix Man page Source code
table2venn Man page Source code
test.region.similarity Man page Source code
vcf2bed Man page Source code
vcf2bedpe Man page Source code
write.vcf Man page Source code
bedr documentation built on April 11, 2025, 5:52 p.m.

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