API for bedr
Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix'
| Global functions | |
|---|---|
| %in.region% | Man page |
| bed2index | Man page |
| bed2vcf | Man page |
| bedr | Man page |
| bedr-package | Man page Man page |
| bedr.join.multiple.region | Man page |
| bedr.join.region | Man page |
| bedr.merge.region | Man page |
| bedr.plot.region | Man page |
| bedr.setup | Man page |
| bedr.snm.region | Man page |
| bedr.sort.region | Man page |
| bedr.subtract.region | Man page |
| catv | Man page |
| check.binary | Man page |
| cluster.region | Man page |
| convert2bed | Man page |
| create.tmp.bed.file | Man page |
| determine.input | Man page |
| df2list | Man page |
| download.datasets | Man page |
| flank.region | Man page |
| get.chr.length | Man page |
| get.example.regions | Man page |
| get.fasta | Man page |
| get.random.regions | Man page |
| grow.region | Man page |
| in.region | Man page |
| index2bed | Man page |
| is.merged.region | Man page |
| is.sorted.region | Man page |
| is.valid.ref | Man page |
| is.valid.region | Man page |
| is.valid.seq | Man page |
| jaccard | Man page |
| modifyList2 | Man page |
| order.region | Man page |
| permute.region | Man page |
| process.input | Man page |
| query.ucsc | Man page |
| read.vcf | Man page |
| reldist | Man page |
| size.region | Man page |
| strsplit2matrix | Man page |
| tabix | Man page |
| table2venn | Man page |
| test.region.similarity | Man page |
| vcf2bed | Man page |
| write.vcf | Man page |
