coloc: Colocalisation tests of two genetic traits

Performs the colocalisation tests described in Plagnol et al (2009), Wallace et al (2013) and Giambartolomei et al (2013).

Install the latest version of this package by entering the following in R:
install.packages("coloc")
AuthorChris Wallace [aut, cre], Claudia Giambartolomei [aut], Vincent Plagnol [ctb]
Date of publication2013-09-29 17:23:08
MaintainerChris Wallace <chris.wallace@cimr.cam.ac.uk>
LicenseGPL
Version2.3-1
https://github.com/chr1swallace/coloc

View on CRAN

Functions

approx.bf.estimates Man page
approx.bf.p Man page
bf Man page
bf,colocBayes-method Man page
ci Man page
ci,colocBayes-method Man page
ci,coloc-method Man page
coloc.abf Man page
coloc.abf.datasets Man page
coloc.abf.snpStats Man page
colocBayesBMA Man page
colocBayes-class Man page
coloc.bma Man page
colocBMA Man page
coloc-class Man page
coloc-package Man page
colocPCs-class Man page
coloc.test Man page
coloc.test.summary Man page
combine.abf Man page
eta Man page
eta,colocBayes-method Man page
eta,coloc-method Man page
fillin Man page
logdiff Man page
logsum Man page
pcs.model Man page
pcs.prepare Man page
process.dataset Man page
sdY.est Man page
summary Man page
summary,colocBayes-method Man page
summary,coloc-method Man page
theta Man page
theta,colocBayes-method Man page
theta,coloc-method Man page
Var.data Man page
Var.data.cc Man page
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Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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