API for compositions
Compositional Data Analysis

Global functions
*.acomp Man page
*.aplus Man page
*.rcomp Man page
*.rmult Man page
*.rplus Man page
+.acomp Man page
+.aplus Man page
+.rcomp Man page
+.rmult Man page
+.rplus Man page
-.acomp Man page
-.aplus Man page
-.rcomp Man page
-.rmult Man page
-.rplus Man page
/.acomp Man page
/.aplus Man page
/.rcomp Man page
/.rmult Man page
/.rplus Man page
Activity10 Man page
Activity31 Man page
AitchisonDistributionIntegrals Man page Source code
AnimalVegetation Man page
ArcticLake Man page
BDL Man page
BDLvalue Man page
Bayesite Man page
Blood23 Man page
Boxite Man page
ClamEast Man page
ClamWest Man page
ClusterFinder1 Man page Source code
ClusterFinder1.acomp Man page Source code
CoDaDendrogram Man page Source code
CompLinModCoReg Man page Source code
ConfRadius Man page Source code
Coxite Man page
DATA08 Man page
DATA10 Man page
DATA18 Man page
DATA31 Man page
Data01 Man page
Data02 Man page
Data03 Man page
Data04 Man page
Data05 Man page
Data06 Man page
Data07 Man page
Data09 Man page
Data11 Man page
Data12 Man page
Data13 Man page
Data14 Man page
Data15 Man page
Data16 Man page
Data17 Man page
Data19 Man page
Data20 Man page
Data21 Man page
Data22 Man page
Data23 Man page
Data24 Man page
Data25 Man page
DiagnosticProb Man page
Firework Man page
Gauss.test Man page Source code
Glacial Man page
HEMF Man page
Hongite Man page
HouseholdExp Man page
Hydrochem Man page
IsMahalanobisOutlier Man page Source code
Kappa Man page Source code
Kongite Man page
MAR Man page
MARvalue Man page
MNAR Man page
MNARvalue Man page
MahalanobisDist Man page Source code
MahalanobisDist.acomp Man page
MahalanobisDist.aplus Man page
MahalanobisDist.rcomp Man page
MahalanobisDist.rmult Man page Source code
MahalanobisDist.rplus Man page
Metabolites Man page
NMV Man page
OutlierClassifier1 Man page Source code
OutlierClassifier1.acomp Man page Source code
PogoJump Man page
PoissonGOF.test Man page Source code
R2 Man page Source code
R2.default Man page Source code
R2.lm Man page Source code
Rsquare Man page
SZ Man page
SZvalue Man page
Sediments Man page
SerumProtein Man page
ShiftOperators Man page
SimulatedAmounts Man page
Skulls Man page
SkyeAFM Man page
Supervisor Man page
WhiteCells Man page
Yatquat Man page
\%*\% Man page
\%*\%.acomp Man page
\%*\%.aplus Man page
\%*\%.default Man page
\%*\%.rmult Man page
acomp Man page Source code
acompGOF.test Man page Source code
acompGOF.test.formula Man page Source code
acompGOF.test.list Man page Source code
acompNormalGOF.test Man page Source code
acompNormalLocation.test Man page Source code
acompTwoSampleGOF.test Man page Source code
acompmargin Man page Source code
alr Man page Source code
alrInv Man page Source code
aplus Man page Source code
apt Man page Source code
aptInv Man page Source code
arrows3D Man page Source code
arrows3D.default Man page Source code
as.data.frame.acomp Man page Source code
as.data.frame.aplus Man page Source code
as.data.frame.rcomp Man page Source code
as.data.frame.rmult Man page Source code
as.data.frame.rplus Man page Source code
as.missingSummary Man page Source code
axis3D Man page Source code
balance Man page Source code
balance.acomp Man page Source code
balance.aplus Man page Source code
balance.rcomp Man page Source code
balance.rplus Man page Source code
balance01 Man page Source code
balance01.acomp Man page Source code Source code
balance01.rcomp Man page Source code
balanceBase Man page Source code
balanceBase.acomp Man page Source code
balanceBase.aplus Man page Source code
balanceBase.rcomp Man page Source code
balanceBase.rplus Man page Source code
barplot.acomp Man page Source code
barplot.aplus Man page
barplot.ccomp Man page
barplot.rcomp Man page
barplot.rplus Man page
binary Man page Source code
binary2logical Man page Source code
biplot3D Man page Source code
biplot3D.default Man page Source code
biplot3D.princomp Man page Source code
bit Man page Source code
bit.character Man page Source code
bit.numeric Man page Source code
bit<- Man page
bit<-.character Man page
bit<-.numeric Man page
bitCount Man page Source code
boxplot.acomp Man page Source code
boxplot.aplus Man page Source code
boxplot.rcomp Man page Source code
boxplot.rplus Man page Source code
ccomp Man page Source code
ccompMultinomialGOF.test Man page Source code
ccompPoissonGOF.test Man page Source code
cdt Man page Source code
cdt.acomp Man page
cdt.aplus Man page
cdt.ccomp Man page
cdt.default Man page Source code
cdt.factor Man page Source code
cdt.rcomp Man page
cdt.rmult Man page Source code
cdt.rplus Man page
cdtInv Man page Source code
cdtInv.acomp Man page Source code
cdtInv.aplus Man page Source code
cdtInv.ccomp Man page Source code
cdtInv.default Man page Source code
cdtInv.factor Man page Source code
cdtInv.rcomp Man page Source code
cdtInv.rmult Man page Source code
cdtInv.rplus Man page Source code
cgram2vgram Man page Source code
clo Man page Source code
clr Man page Source code
clr2ilr Man page Source code
clrInv Man page Source code
clrvar2ilr Man page Source code
coloredBiplot Man page Source code
coloredBiplot.default Man page Source code
coloredBiplot.prcomp Man page Source code
coloredBiplot.princomp Man page Source code
colorsForOutliers1 Man page Source code
colorsForOutliers2 Man page Source code
compOKriging Man page Source code
composition.missing Man page
composition.missings Man page
compositions Man page
compositions-package Man page
compositions.missing Man page
compositions.missings Man page
convex.rcomp Man page Source code
cor Man page Source code
cor.acomp Man page Source code
cor.aplus Man page
cor.default Man page Source code
cor.rcomp Man page
cor.rmult Man page
cor.rplus Man page
cov Man page Source code
cov.acomp Man page
cov.aplus Man page
cov.default Man page Source code
cov.rcomp Man page
cov.rmult Man page
cov.rplus Man page
cpt Man page Source code
cptInv Man page Source code
dAitchison Man page Source code
dist Man page Source code
dist.default Man page Source code
dlnorm.rplus Man page Source code
dnorm.acomp Man page Source code
dnorm.aplus Man page Source code
dnorm.rmult Man page Source code
ellipses Man page Source code
ellipses.acomp Man page
ellipses.aplus Man page Source code
ellipses.rcomp Man page
ellipses.rmult Man page
ellipses.rplus Man page
endmemberCoordinates Man page Source code
endmemberCoordinates.acomp Man page Source code
endmemberCoordinates.aplus Man page Source code
endmemberCoordinates.default Man page Source code
endmemberCoordinates.rplus Man page Source code
endmemberCoordinatesInv Man page Man page Source code
endmemberCoordinatesInv.acomp Man page Source code
endmemberCoordinatesInv.aplus Man page Source code
endmemberCoordinatesInv.rcomp Man page Source code
endmemberCoordinatesInv.rmult Man page Source code
endmemberCoordinatesInv.rplus Man page Source code
fitDirichlet Man page Source code
fitSameMeanDifferentVarianceModel Man page Source code
gadic Man page
geometricmean Man page Source code
geometricmeanCol Man page Source code
geometricmeanRow Man page Source code
getDetectionlimit Man page Source code
groupparts Man page Source code
groupparts.acomp Man page Source code Source code
groupparts.aplus Man page Source code
groupparts.ccomp Man page Source code
groupparts.rcomp Man page Source code
groupparts.rplus Man page Source code
gsi Man page
gsi.APdivideix Source code
gsi.APrecursiu Source code
gsi.AcompGOFEtest Source code
gsi.AddMatrices Source code
gsi.DrawCompEllipses Source code
gsi.OrderIlr Man page Source code
gsi.PrinBal Man page Source code
gsi.acompUniformityGOF.test Man page Source code
gsi.add Man page Source code
gsi.add2pairs Man page Source code
gsi.addCoorInfo Man page Source code
gsi.addclass Man page Source code
gsi.betterPvalue Source code
gsi.buildilrBase Man page Source code
gsi.call Man page Source code
gsi.cleanR Man page Source code
gsi.closespread Man page Source code
gsi.coorInfo Man page
gsi.csum Man page Source code
gsi.diagExtract Man page Source code
gsi.diagGenerate Man page Source code
gsi.div Man page Source code
gsi.drop Man page Source code
gsi.ellipsesCompPanel Source code
gsi.ellipsesRealPanel Source code
gsi.eps Man page
gsi.eq Man page Man page Source code
gsi.expandrcomp Man page Source code
gsi.filtercall Man page Source code
gsi.geometricmean Man page Source code
gsi.geometricmean.Col Man page
gsi.geometricmean.Row Man page
gsi.geometricmeanCol Man page Source code
gsi.geometricmeanRow Man page Source code
gsi.getBalStruct Man page Source code
gsi.getCoorInfo Man page Source code
gsi.getD Man page Source code
gsi.getN Man page Source code
gsi.getPlot Source code
gsi.ilrBase Man page Man page Source code
gsi.ilrBase2signary Man page Source code
gsi.isSingleRow Man page Source code
gsi.mapfrom01 Man page Source code
gsi.mapin01 Man page Source code
gsi.mapmax Man page Source code
gsi.mapmin Man page Source code
gsi.margin Man page Source code
gsi.margin.acomp Man page Source code
gsi.margin.aplus Man page Source code
gsi.margin.rcomp Man page Source code
gsi.margin.rplus Man page Source code
gsi.merge2signary Man page Source code
gsi.mul Man page Source code
gsi.mvNEXTACTIVE Source code
gsi.mvOPTIMAL Source code
gsi.mvPROJclr Source code
gsi.mvREFINESBP Source code
gsi.mvRSCODE Source code
gsi.mvSVDSUGG Source code
gsi.mvVARBAL Source code
gsi.mystructure Source code
gsi.optimalilrBase Man page Source code
gsi.orSum Man page Source code
gsi.pStore Man page
gsi.pairrelativeMatrix Man page Source code
gsi.pairs Man page Source code
gsi.plain Man page Source code
gsi.plotmargin Man page Source code
gsi.plots Man page
gsi.pltTrafo Source code
gsi.recodeC2M Man page Source code
gsi.recodeM2C Man page Source code
gsi.recodeM2Clean Man page Source code
gsi.reset3D Man page Source code
gsi.rsum Man page Source code
gsi.setCoorInfo Man page Source code
gsi.setPlot Source code
gsi.signary2ilrBase Man page
gsi.simshape Man page Source code
gsi.sortedUniforms Source code
gsi.spreadToIsoSpace Man page Source code
gsi.sub Man page Source code
gsi.svdinverse Source code
gsi.svdsolve Man page Source code
gsi.textpanel Man page Source code
gsi.varwithlosts Man page Source code
gsi2.invperm Man page Source code
gsiDouble Source code
gsiFindSolutionWithDerivative Source code
gsiInt Source code
gsiLMCRas1vg Source code
gsiLMCRasMatTerm Source code
gsiLMCRasprod Source code
gsiLMCRassum Source code
gsiLMCRasterm Source code
gsiLMCRterms Source code
gsiStepper Source code
gsih2Dist Source code
has.missings Man page Source code
has.missings.default Man page Source code
has.missings.rmult Man page Source code
idt Man page Source code
idt.acomp Man page Source code
idt.aplus Man page
idt.ccomp Man page
idt.default Man page Source code
idt.factor Man page Source code
idt.rcomp Man page Source code
idt.rmult Man page Source code
idt.rplus Man page
idtInv Man page Source code
idtInv.acomp Man page Source code
idtInv.aplus Man page Source code
idtInv.ccomp Man page Source code
idtInv.default Man page Source code
idtInv.rcomp Man page Source code
idtInv.rmult Man page Source code
idtInv.rplus Man page Source code
iit Man page Source code
iitInv Man page Source code
ilr Man page Source code
ilr2clr Man page Source code
ilrBase Man page Source code
ilrBaseList Man page
ilrInv Man page Source code
ilrvar2clr Man page Source code
ilt Man page Source code
iltInv Man page Source code
ipt Man page Source code
iptInv Man page Source code
is.BDL Man page Source code
is.MAR Man page Source code
is.MNAR Man page Source code
is.MNV Man page
is.NMV Man page Source code
is.SZ Man page Source code
is.WMNAR Man page Man page Source code
is.WZERO Man page Source code
is.acomp Man page Source code
is.aplus Man page Source code
is.ccomp Man page Source code
is.rcomp Man page Source code
is.rmult Man page Source code
is.rplus Man page Source code
isoPortionLines Man page Source code
isoPortionLines.acomp Man page Source code
isoPortionLines.rcomp Man page Source code
isoProportionLines Man page Source code
isoProportionLines.acomp Man page Source code
isoProportionLines.rcomp Man page Source code
jura259 Man page
juraset Man page
kingTetrahedron Man page Source code
lines.acomp Man page Source code
lines.aplus Man page Source code
lines.rcomp Man page Source code
lines.rmult Man page Source code
lines.rplus Man page Source code
logratioVariogram Man page Source code
maxBit Man page Source code
maxBit.character Man page Source code
maxBit.numeric Man page Source code
mcor Man page Source code
mcor.default Man page Source code
mcov Man page Source code
mcov.default Man page Source code
mean.acomp Man page
mean.aplus Man page
mean.ccomp Man page Source code
mean.col Man page
mean.rcomp Man page
mean.rmult Man page Source code
mean.row Man page
mean.rplus Man page
meanCol Man page Source code
meanRow Man page Source code
missingProjector Man page Source code
missingProjector.acomp Man page Source code
missingProjector.aplus Man page Source code
missingProjector.rcomp Man page Source code
missingProjector.rmult Man page Source code
missingProjector.rplus Man page Source code
missingSummary Man page Source code
missingType Man page Source code
missings Man page
missingsInCompositions Man page
mix.2acomp Man page Source code
mix.2aplus Man page Source code
mix.2rcomp Man page Source code
mix.2rmult Man page Source code
mix.2rplus Man page Source code
mix.Read Man page Source code
msd Man page Source code
msd.default Man page Source code
mul.rplus Man page Source code
mvar Man page Source code
mvar.default Man page Source code
names.acomp Man page Source code
names.aplus Man page
names.ccomp Man page
names.rcomp Man page
names.rmult Man page
names.rplus Man page
names<-.acomp Man page
names<-.aplus Man page
names<-.ccomp Man page
names<-.rcomp Man page
names<-.rmult Man page
names<-.rplus Man page
noreplot Man page Source code
norm Man page
norm.acomp Man page Source code
norm.aplus Man page
norm.default Man page Source code
norm.rcomp Man page
norm.rmult Man page Source code
norm.rplus Man page
normalize Man page Source code
normalize.default Man page Source code
observeWithAdditiveError Man page Source code
observeWithDetectionLimit Man page
observeWithDetectionlimit Man page
onAttach Source code
oneOrDataset Man page Source code
outlierplot Man page Source code
outlierplot.acomp Man page Source code
outliersInCompositions Man page
pEmpiricalMahalanobis Man page Source code
pHotellingsTsq Man page Source code
pMaxMahalanobis Man page Source code
pPortionMahalanobis Man page Source code
pQuantileMahalanobis Man page Source code
pairwisePlot Man page Source code
pairwisePlot.default Man page Source code
parameterPosdefClrMat Man page Source code
parameterPosdefMat Man page Source code
parameterRank1ClrMat Man page Source code
parameterRank1Mat Man page Source code
parametricPosdefClrMat Man page Source code
parametricPosdefMat Man page Source code
parametricRank1ClrMat Man page Source code
parametricRank1Mat Man page Source code
pchForOutliers1 Man page Source code
perturbe Man page Source code
perturbe.aplus Man page Source code
plot.acomp Man page Source code
plot.aplus Man page Source code
plot.ccomp Man page Source code
plot.logratioVariogram Man page Source code
plot.missingSummary Man page Source code
plot.princomp.acomp Man page Man page Source code
plot.princomp.aplus Man page Man page Source code
plot.princomp.rcomp Man page Source code
plot.princomp.rplus Man page Source code
plot.rcomp Man page Source code
plot.relativeLoadings.princomp.acomp Man page Source code
plot.relativeLoadings.princomp.aplus Man page Source code
plot.relativeLoadings.princomp.rcomp Man page Source code
plot.relativeLoadings.princomp.rplus Man page Source code
plot.rmult Man page Source code
plot.rplus Man page Source code
plot3D Man page Source code
plot3D.acomp Man page Source code
plot3D.aplus Man page Source code
plot3D.default Man page Source code
plot3D.rcomp Man page
plot3D.rmult Man page Source code
plot3D.rplus Man page Source code
power.acomp Man page Source code
power.aplus Man page Source code
powerofpsdmatrix Man page Source code
predict.princomp.acomp Man page Source code
predict.princomp.aplus Man page Source code
predict.princomp.rcomp Man page Source code
predict.princomp.rplus Man page Source code
princomp.acomp Man page Source code
princomp.aplus Man page Source code
princomp.rcomp Man page Source code
princomp.rmult Man page Source code
princomp.rplus Man page Source code
print.acomp Man page Source code
print.aplus Man page
print.princomp.acomp Man page Source code
print.princomp.aplus Man page Source code
print.princomp.rcomp Man page Source code
print.princomp.rplus Man page Source code
print.rcomp Man page
print.relativeLoadings.princomp.acomp Man page Source code
print.relativeLoadings.princomp.aplus Man page
print.relativeLoadings.princomp.rcomp Man page Source code
print.relativeLoadings.princomp.rplus Man page Source code
print.rmult Man page Source code
print.rplus Man page
pwlrPlot Man page Source code
pwlrplot Man page
qEmpiricalMahalanobis Man page Source code
qHotellingsTsq Man page Source code
qMaxMahalanobis Man page Source code
qPortionMahalanobis Man page Source code
qqnorm.acomp Man page Source code
qqnorm.aplus Man page Source code
qqnorm.rcomp Man page Source code
qqnorm.rplus Man page Source code
rAitchison Man page Source code
rDirichlet Man page
rDirichlet.acomp Man page Source code
rDirichlet.rcomp Man page Source code
rEmpiricalMahalanobis Man page Source code
rMaxMahalanobis Man page Source code
rPortionMahalanobis Man page Source code
rcomp Man page Source code
rcompmargin Man page Source code
read.geoEAS Man page Source code
read.geoeas Man page Source code
relativeLoadings Man page Source code
relativeLoadings.princomp.acomp Man page Source code
relativeLoadings.princomp.aplus Man page Source code
relativeLoadings.princomp.rcomp Man page Source code
relativeLoadings.princomp.rplus Man page Source code
replot Man page Source code
replotable Man page Source code
rlnorm.rplus Man page Source code
rmult Man page Source code
rmultinom.ccomp Man page Source code
rnorm.acomp Man page Source code
rnorm.aplus Man page Source code
rnorm.ccomp Man page Source code
rnorm.rcomp Man page Source code
rnorm.rmult Man page Source code
rnorm.rplus Man page Source code
robust Man page
robustnessInCompositions Man page
rplus Man page Source code
rpois.ccomp Man page Source code
runif.acomp Man page Source code
runif.rcomp Man page Source code
sa.dirichlet Man page
sa.dirichlet.dil Man page
sa.dirichlet.mix Man page
sa.dirichlet5 Man page
sa.dirichlet5.dil Man page
sa.dirichlet5.mix Man page
sa.groups Man page
sa.groups.area Man page
sa.groups.dil Man page
sa.groups.mix Man page
sa.groups5 Man page
sa.groups5.area Man page
sa.groups5.dil Man page
sa.groups5.mix Man page
sa.lognormals Man page
sa.lognormals.dil Man page
sa.lognormals.mix Man page
sa.lognormals5 Man page
sa.lognormals5.dil Man page
sa.lognormals5.mix Man page
sa.missings Man page
sa.missings5 Man page
sa.outliers1 Man page
sa.outliers2 Man page
sa.outliers3 Man page
sa.outliers4 Man page
sa.outliers5 Man page
sa.outliers6 Man page
sa.tnormals Man page
sa.tnormals.dil Man page
sa.tnormals.mix Man page
sa.tnormals5 Man page
sa.tnormals5.dil Man page
sa.tnormals5.mix Man page
sa.uniform Man page
sa.uniform.dil Man page
sa.uniform.mix Man page
sa.uniform5 Man page
sa.uniform5.dil Man page
sa.uniform5.mix Man page
scalar Man page Source code
scalar.default Man page Source code
scale Man page
scale.acomp Man page
scale.aplus Man page
scale.default Man page
scale.rcomp Man page
scale.rmult Man page Source code
scale.rplus Man page
segments.acomp Man page Source code
segments.aplus Man page Source code
segments.rcomp Man page Source code
segments.rmult Man page Source code
segments.rplus Man page Source code
simpleMissingSubplot Man page Source code
simulateMissings Man page Source code
split.acomp Man page Source code
split.aplus Man page
split.ccomp Man page
split.rcomp Man page
split.rmult Man page
split.rplus Man page
straight Man page Source code
straight.acomp Man page Source code
straight.aplus Man page Source code
straight.rcomp Man page Source code
straight.rmult Man page Source code
straight.rplus Man page Source code
sumMissingProjector Man page Source code
sumMissingProjector.acomp Man page Source code
sumMissingProjector.aplus Man page Source code
sumMissingProjector.rcomp Man page Source code
sumMissingProjector.rmult Man page Source code
sumMissingProjector.rplus Man page Source code
summary.acomp Man page Source code
summary.aplus Man page Source code
summary.rcomp Man page Source code
summary.rmult Man page Source code
summary.rplus Man page Source code
ternaryAxis Man page Source code
totals Man page Source code
totals.acomp Man page Source code
totals.aplus Man page
totals.ccomp Man page
totals.rcomp Man page
totals.rplus Man page
tryDebugger Man page Source code
uciptInv Man page Source code
ult Man page Source code
ultInv Man page
unbinary Man page Source code
var Man page Source code
var.acomp Man page Source code
var.aplus Man page Source code
var.default Man page Source code
var.lm Man page Source code
var.mlm Man page Source code
var.rcomp Man page
var.rmult Man page
var.rplus Man page
variation Man page Source code
variation.acomp Man page Source code
variation.aplus Man page Source code
variation.default Man page
variation.rcomp Man page Source code
variation.rmult Man page Source code
variation.rplus Man page
vcovAcomp Man page Source code
vgmFit Man page Source code
vgmFit2lrv Man page Source code
vgmGetParameters Man page Source code
vgmGof Man page Source code
vgmSetParameters Man page Source code
vgram.cardsin Man page Source code
vgram.exp Man page Source code
vgram.gauss Man page Source code
vgram.lin Man page Source code
vgram.nugget Man page Source code
vgram.pow Man page Source code
vgram.sph Man page Source code
vgram2lrvgram Man page Source code
vp.boxplot Man page Source code
vp.logboxplot Man page Source code
vp.qqnorm Man page Source code
whichBits Man page Source code
zeroreplace Man page Source code
compositions documentation built on June 14, 2018, 5:03 p.m.