Files in graph4lg
Build Graphs for Landscape Genetics Analysis
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/add_nodes_attr.R
R/get_graphab_raster_codes.R
R/graph_to_df.R
R/graph_to_shp.R
R/df_to_pw_mat.R
R/genind_to_structure.R
R/get_graphab_metric.R
R/graphab_link.R
R/mat_gen_dist.R
R/convert_cd.R
R/graphab_modul.R
R/compute_graph_modul.R
R/pw_mat_to_df.R
R/other_objects.R
R/compar_r_fisher.R
R/graph_plan.R
R/reorder_mat.R
R/gen_graph_indep.R
R/structure_to_genind.R
R/data.R
R/mat_cost_dist.R
R/graph_node_compar.R
R/graphab_to_igraph.R
R/link_compar.R
R/mat_pw_dps.R
R/get_graphab_linkset_cost.R
R/graphab_metric.R
R/mat_geo_dist.R
R/compute_node_metric.R
R/gstud_to_genind.R
R/graphab_corridor.R
R/gen_graph_thr.R
R/genind_to_genepop.R
R/pop_rare_gen_index.R
R/graphab_capacity.R
R/internal_functions.R
R/plot_graph_lg.R
R/get_graphab.R
R/dist_great_circle.R
R/graphab_pointset.R
R/pop_gen_index.R
R/gen_graph_topo.R
R/graph_plot_compar.R
R/loci_to_genind.R
R/get_graphab_linkset.R
R/graph_topo_compar.R
R/dist_max_corr.R
R/aux_25_09.R
R/graphab_project_desc.R
R/graphab_project.R
R/plot_w_hist.R
R/graphab_graph.R
R/g_percol.R
R/scatter_dist_g.R
R/sample_raster.R
R/mat_pw_fst.R
R/graphab_interpol.R
R/check_merge.R
R/kernel_param.R
R/scatter_dist.R
R/genepop_to_genind.R
R/graph_modul_compar.R
inst/REFERENCES.bib
inst/CITATION
inst/doc/graph_comparisons_4.html
inst/doc/genetic_graph_2.html
inst/doc/input_data_processing_1.R
inst/doc/genetic_graph_2.Rmd
inst/doc/graph_comparisons_4.Rmd
inst/doc/genetic_graph_2.R
inst/doc/landscape_graph_3.html
inst/doc/input_data_processing_1.html
inst/doc/landscape_graph_3.R
inst/doc/graph_comparisons_4.R
inst/doc/landscape_graph_3.Rmd
inst/doc/input_data_processing_1.Rmd
inst/extdata/res_g.RDa
inst/extdata/patches_10.fix
inst/extdata/patches_10.csv
inst/extdata/patches_10.prj
inst/extdata/patches_10.dbf
inst/extdata/data_tuto.rda
inst/extdata/liens_simul_10.shx
inst/extdata/patches_10.shp
inst/extdata/liens_simul_10.dbf
inst/extdata/liens_simul_10.prj
inst/extdata/patches.csv
inst/extdata/liens_simul_10.fix
inst/extdata/patches.shp
inst/extdata/liens_simul_10.shp
inst/extdata/data_ex_str.txt
inst/extdata/patches_10.shx
inst/extdata/patches.prj
inst/extdata/patches.shx
inst/extdata/patches.dbf
inst/extdata/gpop_51_sim22_01_25.txt
inst/extdata/liens_simul_10.csv
inst/extdata/patches.fix
inst/extdata/gpop_simul_10_g100_04_20.txt
inst/extdata/rast_simul50.RDa
inst/extdata/grphb_ex/links.prj
inst/extdata/grphb_ex/voronoi.prj
inst/extdata/grphb_ex/links.shx
inst/extdata/grphb_ex/mod2_graph-voronoi.shp
inst/extdata/grphb_ex/PC.txt
inst/extdata/grphb_ex/lkst1-links.prj
inst/extdata/grphb_ex/mod2_graph-voronoi.fix
inst/extdata/grphb_ex/graph-voronoi.shx
inst/extdata/grphb_ex/Exo-file28d41187f8d_lkst1.dbf
inst/extdata/grphb_ex/graph-voronoi.dbf
inst/extdata/grphb_ex/links.shp
inst/extdata/grphb_ex/lkst1-links.fix
inst/extdata/grphb_ex/mod2_graph-voronoi.dbf
inst/extdata/grphb_ex/lkst1-links.shx
inst/extdata/grphb_ex/graph-voronoi.prj
inst/extdata/grphb_ex/links.dbf
inst/extdata/grphb_ex/lkst1-links-intra.csv
inst/extdata/grphb_ex/patches.csv
inst/extdata/grphb_ex/lkst1-links.shp
inst/extdata/grphb_ex/voronoi.fix
inst/extdata/grphb_ex/patches.shp
inst/extdata/grphb_ex/voronoi.shp
inst/extdata/grphb_ex/graph-voronoi.shp
inst/extdata/grphb_ex/Exo-file28d41187f8d_lkst1.prj
inst/extdata/grphb_ex/lkst1-links.csv
inst/extdata/grphb_ex/links.fix
inst/extdata/grphb_ex/Exo-file28d41187f8d_lkst1.shx
inst/extdata/grphb_ex/grphb_ex.xml
inst/extdata/grphb_ex/Exo-file28d41187f8d_lkst1.shp
inst/extdata/grphb_ex/patches.prj
inst/extdata/grphb_ex/patches.shx
inst/extdata/grphb_ex/patches.dbf
inst/extdata/grphb_ex/Exo-file28d41187f8d_lkst1.fix
inst/extdata/grphb_ex/lkst1-links.dbf
inst/extdata/grphb_ex/mod2_graph-voronoi.shx
inst/extdata/grphb_ex/graph-voronoi.fix
inst/extdata/grphb_ex/voronoi.dbf
inst/extdata/grphb_ex/patches.fix
inst/extdata/grphb_ex/voronoi.shx
inst/extdata/grphb_ex/mod2_graph-voronoi.prj
build/vignette.rds
build/partial.rdb
vignettes/genetic_graph_2.Rmd
vignettes/graph_comparisons_4.Rmd
vignettes/biblio_vignette.bib
vignettes/landscape_graph_3.Rmd
vignettes/input_data_processing_1.Rmd
data/pts_pop_simul.rda
data/data_ex_loci.rda
data/data_tuto.rda
data/pts_pop_ex.rda
data/data_ex_genind.rda
data/data_ex_gstud.rda
data/data_simul_genind.rda
man/gstud_to_genind.Rd
man/mypalette.Rd
man/data_simul_genind.Rd
man/loci_to_genind.Rd
man/compar_r_fisher.Rd
man/data_ex_genind.Rd
man/harm_mean.Rd
man/gen_graph_thr.Rd
man/get_graphab_linkset_cost.Rd
man/mat_cost_dist.Rd
man/pop_rare_gen_index.Rd
man/graphab_graph.Rd
man/graphab_modul.Rd
man/pw_mat_to_df.Rd
man/scatter_dist_g.Rd
man/mat_pw_fst.Rd
man/get_graphab.Rd
man/check_merge.Rd
man/genind_to_genepop.Rd
man/graphab_capacity.Rd
man/gen_graph_indep.Rd
man/mat_gen_dist.Rd
man/compute_node_metric.Rd
man/get_graphab_raster_codes.Rd
man/scatter_dist.Rd
man/pts_pop_simul.Rd
man/graph_topo_compar.Rd
man/graph_to_df.Rd
man/dist_gc_hvs.Rd
man/graph_node_compar.Rd
man/graphab_metric.Rd
man/genepop_to_genind.Rd
man/dist_great_circle.Rd
man/graphab_interpol.Rd
man/structure_to_genind.Rd
man/sc01.Rd
man/data_ex_loci.Rd
man/genind_to_structure.Rd
man/sample_raster.Rd
man/plot_w_hist.Rd
man/graph_plot_compar.Rd
man/graphab_corridor.Rd
man/dist_gc_vicenty.Rd
man/kernel_param.Rd
man/deg2rad.Rd
man/graphab_to_igraph.Rd
man/pts_pop_ex.Rd
man/data_tuto.Rd
man/graph_plan.Rd
man/convert_cd.Rd
man/mat_geo_dist.Rd
man/reorder_mat.Rd
man/gini_coeff.Rd
man/patch_areas.Rd
man/graphab_project_desc.Rd
man/pop_gen_index.Rd
man/get_graphab_linkset.Rd
man/plot_graph_lg.Rd
man/g_percol.Rd
man/compute_graph_modul.Rd
man/gen_graph_topo.Rd
man/data_ex_gstud.Rd
man/mat_pw_dps.Rd
man/graph_modul_compar.Rd
man/add_nodes_attr.Rd
man/link_compar.Rd
man/graphab_project.Rd
man/df_to_pw_mat.Rd
man/graphab_pointset.Rd
man/dist_gc_slc.Rd
man/get_graphab_metric.Rd
man/graphab_link.Rd
man/dist_max_corr.Rd
man/graph_to_shp.Rd
