Files in hsphase
Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

MD5

NAMESPACE

DESCRIPTION

R/prCalus.R R/maf.R R/ohd.R R/hsphase.R R/ohplot.R R/hss.R R/co.R R/pogc.R R/groupMatSingle.R R/fastDist.R R/bmh.R R/oneRowhaplotpe2twoRowhaplotype.R R/fixSwitches.R R/prSimple.R R/namingInferedPedigree.R R/rpoh.R R/cs.R R/prManual.R R/ssp.R R/rpohhsphase.R R/two2oneRow.R R/fixBothStrandSireOrigin.R R/switch.R R/aio.R R/impute.R R/hh.R R/rplot.R R/ibdCluster.R R/ohg.R R/imageplot.R R/switchDetector.R R/fixRotation.R R/para.R R/simulateHalfsib.R

src/FastDist.h

src/fixRotation.cpp

src/mhMat.cpp

src/Makevars.win

src/Makevars

src/Ohd.h

src/swDetect.h

src/ibdcluster.h

src/FastDist.cpp

src/memory.cpp

src/FillGap.h

src/diag.h

src/oh.cpp

src/hsp.h

src/ohp.cpp

src/MAF.h

src/block4Phase.h

src/Ohd.cpp

src/block.h

src/co.cpp

src/ohg.cpp

src/ibdcluster.cpp

src/block.cpp

src/co.h

src/hsp.cpp

src/FixBothStrand.cpp

src/ohp.h

src/SwitchDetector.cpp

src/diag.cpp

src/swDetect.cpp

src/memory.h

src/SwitchDetector.h

src/SwitchAdd.h

src/TypeConversion.h

src/MAF.cpp

src/mhMat.h

src/oh.h

src/TypeConversion.cpp

src/fixRotation.h

src/ohg.h

src/FixBothStrand.h

src/SwitchAdd.cpp

src/FillGap.cpp

src/block4Phase.cpp

src/main.cpp

inst/CITATION

inst/doc/hsphase.R

inst/doc/hsphase.Rnw

inst/doc/hsphase.pdf demo/hsphase.R

demo/00Index

build/vignette.rds

vignettes/hsphase.Rnw

data/map.txt.gz

data/genotypes.rda

data/pedigree.txt.gz

man/bmh.Rd man/pedigree.Rd man/para.Rd man/ohd.Rd man/ohg.Rd man/dot-phfnoGenotype.Rd man/dot-prSimple.Rd man/dot-prManual.Rd man/cs.Rd man/dot-fixRotation.Rd man/recombinations.Rd man/hbp.Rd man/ssp.Rd man/dot-maf.Rd man/rplot.Rd man/dot-ibdCluster.Rd man/switchDetector.Rd man/pedigreeNaming.Rd man/co.Rd man/addSwitch.Rd man/map.Rd man/phf.Rd man/dot-fixBothStrand.Rd man/dot-ptr2por.Rd man/hss.Rd man/pm.Rd man/ohplot.Rd man/impute.Rd man/readGenotype.Rd man/dot-fillGap.Rd man/dot-rpohhsphase.Rd man/hsphase-package.Rd man/hh.Rd man/dot-fastdist.Rd man/dot-o2tH.Rd man/aio.Rd man/rpoh.Rd man/dot-hblock.Rd man/dot-simulateHalfsib.Rd man/fixSW.Rd man/genotypes.Rd man/dot-prCalus.Rd man/imageplot.Rd man/pogc.Rd man/groupMatSingle.Rd

hsphase documentation built on Feb. 17, 2026, 5:07 p.m.

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hsphase
Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

Files in hsphase
Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

R Package Documentation

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hsphase Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

Files in hsphase Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

R Package Documentation

Browse R Packages

We want your feedback!

hsphase
Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

Files in hsphase
Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data