Files in metasnf
Meta Clustering with Similarity Network Fusion

MD5

NAMESPACE

DESCRIPTION

R/dplyr.R R/ari_matrix.R R/rbind.R R/solutions_df.R R/summary_features.R R/as_matrix.R R/print.R R/sim_mats_list.R R/summary.R R/parallel.R R/dist_fns_list.R R/heatmaps.R R/batch_snf.R R/alluvial_plot.R R/as_sim_mats_list.R R/assignment.R R/feature_plots.R R/label_propagation.R R/weights_matrix.R R/data.R R/n_observations.R R/deprecated.R R/coclustering.R R/features.R R/as_list.R R/merge.R R/as_data_frame.R R/nmi.R R/as_ari_matrix.R R/arrange.R R/label_meta_clusters.R R/clust_fns_list.R R/nclust_estimation.R R/as_settings_df.R R/signal.R R/settings_df.R R/linear_adjust.R R/ext_solutions_df.R R/uids.R R/c.R R/snf_config.R R/get_representative_solutions.R R/manhattan_plot.R R/as_weights_matrix.R R/metasnf-package.R R/as_snf_config.R R/t.R R/as_data_list.R R/n_features.R R/extraction.R R/utils.R R/quality_measures.R R/data_list.R inst/doc/a_simple_example.Rmd inst/doc/clustering_algorithms.Rmd inst/doc/correlation_plots.R

inst/doc/getting_started.html

inst/doc/stability_measures.Rmd

inst/doc/quality_measures.html

inst/doc/distance_metrics.html

inst/doc/nmi_scores.R inst/doc/snf_schemes.R inst/doc/parallel_processing.R inst/doc/troubleshooting.R

inst/doc/stability_measures.html

inst/doc/parallel_processing.html

inst/doc/clustering_algorithms.html

inst/doc/label_propagation.R

inst/doc/correlation_plots.html

inst/doc/imputations.html

inst/doc/getting_started.Rmd inst/doc/feature_plots.Rmd

inst/doc/feature_weights.html

inst/doc/nmi_scores.html

inst/doc/a_simple_example.R

inst/doc/snf_schemes.html

inst/doc/imputations.Rmd inst/doc/clustering_algorithms.R inst/doc/correlation_plots.Rmd

inst/doc/manhattan_plots.html

inst/doc/label_propagation.html

inst/doc/data_list.html

inst/doc/imputations.R inst/doc/a_complete_example.R inst/doc/distance_metrics.R inst/doc/manhattan_plots.R

inst/doc/confounders.html

inst/doc/confounders.Rmd inst/doc/data_list.Rmd

inst/doc/feature_plots.html

inst/doc/manhattan_plots.Rmd inst/doc/quality_measures.Rmd

inst/doc/similarity_matrix_heatmap.html

inst/doc/label_propagation.Rmd inst/doc/snf_schemes.Rmd inst/doc/alluvial_plots.R

inst/doc/alluvial_plots.html

inst/doc/troubleshooting.Rmd inst/doc/snf_config.R inst/doc/feature_weights.Rmd inst/doc/distance_metrics.Rmd inst/doc/a_complete_example.Rmd inst/doc/feature_weights.R inst/doc/nmi_scores.Rmd

inst/doc/troubleshooting.html

inst/doc/a_complete_example.html

inst/doc/snf_config.html

inst/doc/confounders.R inst/doc/snf_config.Rmd inst/doc/getting_started.R inst/doc/quality_measures.R

inst/doc/a_simple_example.html

inst/doc/data_list.R

build/vignette.rds

build/partial.rdb

tests/testthat.R tests/testthat/test-settings_df.R tests/testthat/test-data_list.R tests/testthat/test-batch_snf.R tests/testthat/test-utils.R vignettes/a_simple_example.Rmd vignettes/clustering_algorithms.Rmd

vignettes/annotated_ari_hm2.png

vignettes/annotated_ari_hm.png

vignettes/var_manhattan.png

vignettes/stability_measures.Rmd

vignettes/settings_matrix_heatmap_ordered.png

vignettes/config_hm.png

vignettes/cocluster_density_l.png

vignettes/meta_cluster_heatmap.png

vignettes/alluvial_plots.Rmd

vignettes/assoc_pval_heatmap_l.png

vignettes/methylation_heatmap.png

vignettes/mc_manhattan_clean_l.png

vignettes/esm_manhattan_l.png

vignettes/annotated_ari_hm_l.png

vignettes/getting_started.Rmd vignettes/feature_plots.Rmd

vignettes/ss_ari_hm_l.png

vignettes/cc_hm_l.png

vignettes/ari_mc_hm.png

vignettes/pval_heatmap_ordered.png

vignettes/imputations.Rmd

vignettes/meta_cluster_shiny_l.png

vignettes/correlation_plots.Rmd

vignettes/annotated_sm_heatmap.png

vignettes/similarity_matrix_heatmap.png

vignettes/confounders.Rmd vignettes/data_list.Rmd

vignettes/adjusted_rand_index_heatmap.png

vignettes/manhattan_plots.Rmd

vignettes/gene_expression_heatmap_l.png

vignettes/quality_measures.Rmd vignettes/label_propagation.Rmd vignettes/snf_schemes.Rmd

vignettes/annotated_ari_hm2_l.png

vignettes/mc_manhattan_clean.png

vignettes/troubleshooting.Rmd

vignettes/mc_manhattan2.png

vignettes/mc_manhattan2_l.png

vignettes/inter_ss_ari_hm.png

vignettes/assoc_pval_heatmap3_l.png

vignettes/feature_weights.Rmd vignettes/distance_metrics.Rmd vignettes/a_complete_example.Rmd

vignettes/mc_manhattan.png

vignettes/assoc_pval_heatmap2_l.png

vignettes/nmi_scores.Rmd vignettes/snf_config.Rmd

vignettes/association_pval_tests.svg

vignettes/assoc_pval_heatmap4_l.png

data/abcd_cort_t.rda

data/expression_df.rda

data/depress.rda

data/abcd_cort_sa.rda

data/methylation_df.rda

data/abcd_anxiety.rda

data/income.rda

data/abcd_income.rda

data/abcd_subc_v.rda

data/cancer_diagnosis_df.rda

data/anxiety.rda

data/diagnosis_df.rda

data/abcd_h_income.rda

data/age_df.rda

data/abcd_depress.rda

data/abcd_colour.rda

data/gender_df.rda

data/pubertal.rda

data/cort_t.rda

data/fav_colour.rda

data/abcd_pubertal.rda

data/subc_v.rda

data/cort_sa.rda

man/figures/lifecycle-stable.svg

man/figures/lifecycle-superseded.svg

man/figures/lifecycle-soft-deprecated.svg

man/figures/lifecycle-questioning.svg

man/figures/lifecycle-archived.svg

man/figures/lifecycle-defunct.svg

man/figures/lifecycle-experimental.svg

man/figures/lifecycle-deprecated.svg

man/figures/lifecycle-maturing.svg

metasnf documentation built on April 3, 2025, 5:40 p.m.

rdrr.io home R language documentation Run R code online

CRAN packages Bioconductor packages R-Forge packages GitHub packages

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

metasnf
Meta Clustering with Similarity Network Fusion

Files in metasnf
Meta Clustering with Similarity Network Fusion

R Package Documentation

Browse R Packages

We want your feedback!

metasnf Meta Clustering with Similarity Network Fusion

Files in metasnf Meta Clustering with Similarity Network Fusion

R Package Documentation

Browse R Packages

We want your feedback!

metasnf
Meta Clustering with Similarity Network Fusion

Files in metasnf
Meta Clustering with Similarity Network Fusion