sub.taxa.label: Substitute the tip labels of a phylogenetic tree
In phylotools: Phylogenetic Tools for Eco-Phylogenetics
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Substitute the tip labels of a phylogenetic tree according to a reference data table.
Usage
1
sub.taxa.label(tree, dat)
Arguments
tree
Phylogenetic tree
dat
A dataframe with the first column the tip labels and the second column the new names.
Value
A Phylogenetic tree with the tip labels substituted
Author(s)
Jinlong Zhang jinlongzhang01@gmail.com
See Also
Examples
1
2
3
4
5
6
library(ape)
data(bird.families)
tips <- bird.families$tip.label
abr <- paste("fam",1:length(tips), sep = "")
dat <- data.frame(tips, abr)
ntree <- sub.taxa.label(bird.families, dat)
phylotools documentation built on May 2, 2019, 3:25 a.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Substitute the tip labels of a phylogenetic tree according to a reference data table.
Usage
1 | sub.taxa.label(tree, dat)
|
Arguments
tree |
Phylogenetic tree |
dat |
A dataframe with the first column the tip labels and the second column the new names. |
Value
A Phylogenetic tree with the tip labels substituted
Author(s)
Jinlong Zhang jinlongzhang01@gmail.com
See Also
Examples
1 2 3 4 5 6 | library(ape)
data(bird.families)
tips <- bird.families$tip.label
abr <- paste("fam",1:length(tips), sep = "")
dat <- data.frame(tips, abr)
ntree <- sub.taxa.label(bird.families, dat)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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