bd: Convert object of class '"birthdeath"' to raw birth & death...
In phytools: Phylogenetic Tools for Comparative Biology (and Other Things)
bd R Documentation
Convert object of class "birthdeath" to raw birth & death rates
Description
Converts an object of class "birthdeath" (from birthdeath) to a vector with the ML birth & death rates.
Usage
bd(x)
Arguments
x
object of class "birthdeath".
Details
This is now somewhat obsolete as phytools now contains functions to fit birth-death and pure-birth diversification models from trees (fit.bd and fit.yule) that also take into account incomplete sampling fraction.
Value
A vector.
Author(s)
Liam Revell liam.revell@umb.edu
References
Revell, L. J. (2024) phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things). PeerJ, 12, e16505.
See Also
birthdeath, fit.bd, fit.yule
phytools documentation built on June 22, 2024, 10:39 a.m.
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| bd | R Documentation |
Convert object of class "birthdeath" to raw birth & death rates
Description
Converts an object of class "birthdeath" (from birthdeath) to a vector with the ML birth & death rates.
Usage
bd(x)
Arguments
x |
object of class |
Details
This is now somewhat obsolete as phytools now contains functions to fit birth-death and pure-birth diversification models from trees (fit.bd and fit.yule) that also take into account incomplete sampling fraction.
Value
A vector.
Author(s)
Liam Revell liam.revell@umb.edu
References
Revell, L. J. (2024) phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things). PeerJ, 12, e16505.
See Also
birthdeath, fit.bd, fit.yule
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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