renum.pdb: Renumerate Residue Position

In ptm: Analyses of Protein Post-Translational Modifications

Renumerate Residue Position

Description

Renumerates residue position of a PDB sequence to match the corresponding UniProt sequence.

Usage

renum.pdb(pdb, chain, uniprot)

Arguments

pdb	the PDB ID or the path to a pdb file.
chain	the chain of interest.
uniprot	the UniProt ID.

Value

Returns a dataframe containing the re-numerated sequence.

Author(s)

Juan Carlos Aledo

See Also

is.at(), aa.at(), renum.meto(), renum(), aa.compo()

Examples

## Not run: renum.pdb(pdb = '121P', chain = 'A', uniprot = 'P01112')

ptm documentation built on Aug. 7, 2022, 5:05 p.m.