Description Usage Arguments Value Author(s) See Also Examples

`tReem`

is a function to group amplification curves
from a quantitative PCR experiment according to their shape.
Either the Pearson correlation coefficient or the Hausdorff
distance is used as measure. In most cases the grouping based
on the Pearson correlation coefficient is sufficient. The
grouping based on the Hausdorff distance can be very slow
for large data sets.

1 |

`data` |
is the cycle dependent fluorescence amplitude (y-axis). |

`cor` |
is a logical parameter. If set true, the Pearson correlation is used as distance measure. If set FALSE the Hausdorff distance will be used. |

`k` |
an integer scalar or vector with the desired number of groups. |

gives a `data.frame`

(S3 class, type of `list`

) as output for the manual analyzed data

Stefan Roediger, Andrej-Nikolai Spiess

`metric.hausdorff`

, `cutree`

,
`qPCR2fdata`

, `hclust`

,
`cor`

1 2 3 4 |

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.