get_ctype_subc_prop_associations: Compute and plot associations between donor factor scores and...

In scITD: Single-Cell Interpretable Tensor Decomposition

Compute and plot associations between donor factor scores and donor proportions of cell subtypes

Description

Compute and plot associations between donor factor scores and donor proportions of cell subtypes

Usage

get_ctype_subc_prop_associations(
  container,
  ctype,
  res,
  n_col = 2,
  alt_name = NULL
)

Arguments

container	environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses
ctype	character The cell type to get results for
res	numeric The clustering resolution to retrieve
n_col	numeric The number of columns to organize the plots into (default=2)
alt_name	character Alternate name for the cell type used in clustering (default=NULL)

Value

The project container with a cowplot figure of results plots in container$plots$ctype_prop_factor_associations.

scITD documentation built on Sept. 8, 2023, 5:11 p.m.