get_lm_pvals: Compute gene-factor associations using univariate linear...

In scITD: Single-Cell Interpretable Tensor Decomposition

Compute gene-factor associations using univariate linear models

Description

Compute gene-factor associations using univariate linear models

Usage

get_lm_pvals(container, n.cores = container$experiment_params$ncores)

Arguments

container	environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses
n.cores	Number of cores to use (default = container$experiment_params$ncores)

Value

The project container with a vector of adjusted p-values for the gene-factor associations in container$gene_score_associations.

Examples

test_container <- get_lm_pvals(test_container, n.cores=1)

scITD documentation built on Sept. 8, 2023, 5:11 p.m.