get_gene_set_vectors: Get logical vectors indicating which genes are in which...

In scITD: Single-Cell Interpretable Tensor Decomposition

Get logical vectors indicating which genes are in which pathways

Description

Get logical vectors indicating which genes are in which pathways

Usage

get_gene_set_vectors(container, gene_sets, tmp_casted_num)

Arguments

container	environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses
gene_sets	character Vector of gene sets to extract genes for
tmp_casted_num	matrix The gene by cell type loadings matrix

Value

A list of the logical vectors for each pathway.

scITD documentation built on Sept. 8, 2023, 5:11 p.m.