get_significance_vectors: Get vectors indicating which genes are significant in which...

In scITD: Single-Cell Interpretable Tensor Decomposition

Get vectors indicating which genes are significant in which cell types for a factor of interest

Description

Get vectors indicating which genes are significant in which cell types for a factor of interest

Usage

get_significance_vectors(container, factor_select, ctypes)

Arguments

container	environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses
factor_select	numeric The factor to query
ctypes	character The cell types used in all the analysis ordered as they appear in the loadings matrix

Value

A list of the adjusted p-values for expression of each gene in each cell type in association with a factor of interest.

scITD documentation built on Sept. 8, 2023, 5:11 p.m.