get_subclust_enr_dotplot: Get scatter plot for association of a cell subtype proportion...

In scITD: Single-Cell Interpretable Tensor Decomposition

Get scatter plot for association of a cell subtype proportion with scores for a factor

Description

Get scatter plot for association of a cell subtype proportion with scores for a factor

Usage

get_subclust_enr_dotplot(
  container,
  ctype,
  res,
  subtype,
  factor_use,
  ctype_cur = ctype
)

Arguments

container	environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses
ctype	character The cell type to plot
res	numeric The subcluster resolution to use
subtype	numeric The number corresponding with the subtype of the major cell type to plot
factor_use	numeric The factor to plot
ctype_cur	character The name of the major cell type used in the main analysis

Value

A ggplot object of each donor's cell subcluster proportions against donor scores for a selected factor.

scITD documentation built on Sept. 8, 2023, 5:11 p.m.