get_subclust_enr_hmap: Get heatmap of subtype proportion associations for each...

In scITD: Single-Cell Interpretable Tensor Decomposition

Get heatmap of subtype proportion associations for each celltype/subtype and each factor

Description

Get heatmap of subtype proportion associations for each celltype/subtype and each factor

Usage

get_subclust_enr_hmap(container, all_ctypes, all_res, all_factors)

Arguments

container	environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses
all_ctypes	character A vector of the cell types to include
all_res	numeric A vector of resolutions matching the all_ctypes parameter
all_factors	numerc A vector of the factors to compute associations for

Value

A ComplexHeatmap object in container$plots$subc_enr_hmap showing the univariate associations between cell subcluster proportions and each factor.

scITD documentation built on Sept. 8, 2023, 5:11 p.m.