addSTRINGNetMappings: Add Cytoscape mapping for STRINGNet
In stringgaussnet: PPI and Gaussian Network Construction from Transcriptomic Analysis Results Integrating a Multilevel Factor
Description
Usage
Arguments
Details
Value
See Also
View source: R/addSTRINGNetMappings.R
Description
This function allows to add edge mapping in a pre-defined Cytoscape style. This function is called in addNetworkStyle().
Usage
1
addSTRINGNetMappings(mappings)
Arguments
mappings
A list where will be added the mapping attributes
Details
The edge colors depend on the interaction source given by STRING, black being attributed for combined scores. The edge transparency depends on the confidence score given by STRING.
Value
The mappings list updated, containing added JSON-like lists (converted to JSON objects by the addNetworkStyle function).
See Also
stringgaussnet documentation built on May 29, 2017, 10:50 a.m.
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Description Usage Arguments Details Value See Also
View source: R/addSTRINGNetMappings.R
Description
This function allows to add edge mapping in a pre-defined Cytoscape style. This function is called in addNetworkStyle().
Usage
1 | addSTRINGNetMappings(mappings)
|
Arguments
mappings |
A list where will be added the mapping attributes |
Details
The edge colors depend on the interaction source given by STRING, black being attributed for combined scores. The edge transparency depends on the confidence score given by STRING.
Value
The mappings list updated, containing added JSON-like lists (converted to JSON objects by the addNetworkStyle function).
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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