addShortPathSTRINGNetMappings: Add Cytoscape mapping for ShortPathSTRINGNet
In stringgaussnet: PPI and Gaussian Network Construction from Transcriptomic Analysis Results Integrating a Multilevel Factor
Description
Usage
Arguments
Details
Value
See Also
View source: R/addShortPathSTRINGNetMappings.R
Description
This function allows to add edge mapping in a pre-defined Cytoscape style. This function is called in addNetworkStyle().
Usage
1
addShortPathSTRINGNetMappings(mappings)
Arguments
mappings
A list where will be added the mapping attributes
Details
The edge transparency depends on the distance computed by Dijkstra's algorithm. Direct interactions are displayed by black solid lines, whereas indirect interactions are displayed by blue dashed lines.
Value
The mappings list updated, containing added JSON-like lists (converted to JSON objects by the addNetworkStyle() function).
See Also
stringgaussnet documentation built on May 29, 2017, 10:50 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value See Also
View source: R/addShortPathSTRINGNetMappings.R
Description
This function allows to add edge mapping in a pre-defined Cytoscape style. This function is called in addNetworkStyle().
Usage
1 | addShortPathSTRINGNetMappings(mappings)
|
Arguments
mappings |
A list where will be added the mapping attributes |
Details
The edge transparency depends on the distance computed by Dijkstra's algorithm. Direct interactions are displayed by black solid lines, whereas indirect interactions are displayed by blue dashed lines.
Value
The mappings list updated, containing added JSON-like lists (converted to JSON objects by the addNetworkStyle() function).
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.