findShortestPathways: Find shortest pathways between selected nodes
In stringgaussnet: PPI and Gaussian Network Construction from Transcriptomic Analysis Results Integrating a Multilevel Factor
Description
Usage
Arguments
Details
Value
See Also
View source: R/findShortestPathways.R
Description
This functions finds shortest pathways between selected nodes in a distance matrix.
Usage
1
findShortestPathways(BetweenNodesDistances, SelectedNodes)
Arguments
BetweenNodesDistances
A distance matric computed by convertToDistGraph()
SelectedNodes
The selected nodes to keep after shortest paths conversion
Details
The Dijkstra's algorithm from the igraph package is used to compute shortest paths.
Value
A list with distances, intermediates and number of intermediates given by the igraph package
See Also
getShortestPaths, convertToDistGraph
stringgaussnet documentation built on May 29, 2017, 10:50 a.m.
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Description Usage Arguments Details Value See Also
View source: R/findShortestPathways.R
Description
This functions finds shortest pathways between selected nodes in a distance matrix.
Usage
1 | findShortestPathways(BetweenNodesDistances, SelectedNodes)
|
Arguments
BetweenNodesDistances |
A distance matric computed by convertToDistGraph() |
SelectedNodes |
The selected nodes to keep after shortest paths conversion |
Details
The Dijkstra's algorithm from the igraph package is used to compute shortest paths.
Value
A list with distances, intermediates and number of intermediates given by the igraph package
See Also
getShortestPaths, convertToDistGraph
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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