NEWS.md

In viewpoly: A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species

viewpoly 0.1.0

• Added a NEWS.md file to track changes to the package.

viewpoly 0.1.1

• Bug fixed in VIEWgenome module
• Add GitHub link in DESCRIPTION
• Add tutorial video link
• Update README.md

viewpoly 0.2.0

Main modifications made during JOSS review:

• Fix broken links
• Fix download of the images with .tiff format
• Remove warnings and error messages displayed in the console during app execution
• Improve error messages
• Improve function documentation
• Aesthetic improvements
• App is also available on shinyapps.io: https://cris-taniguti.shinyapps.io/viewpoly/
• Functional testing added
• Disable the download buttons when image parameters are not reliable
• Title of boxes are now also collapsible

viewpoly 0.3.0

• Support for diaQTL multi-population evaluation
• User-defined parents names in effects graphics
• Download of plots with RData format
• Docker image available
• Allow to exclude haplotypes from haplotypes probability view in VIEWqtl module
• Bug fixed to upload genome through genome link
• Bug fixed to upload viewpoly object

viewpoly 0.3.1

• Avoid errors if user has not internet connection
• Inform number and ID of individuals selected by haplotypes
• README updated to include new vignette for server version (available at brach publishing_data)

viewpoly 0.3.2

• CRAN version without all testthat tests

viewpoly 0.4.0

• Add HIDECAN module

viewpoly 0.4.1

• Add OneMap results as input
• Add port option in JBrowseR interface

viewpoly documentation built on May 29, 2024, 1:26 a.m.