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In viewpoly: A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species
HIDECAN - How to Cite
VIEWpoly Citation
Taniguti, C. H., de Siqueira Gesteira, G., Lau, J., da Silva Pereira, G., Zeng, Z.-B., Byrne, D., Riera-Lizarazu, O., & Mollinari, M. (2022). VIEWpoly: a visualization tool to integrate and explore results of polyploid genetic analysis. Journal of Open Source Software, 7(74), 4242. https://doi.org/10.21105/joss.04242
HIDECAN Citation
Angelin-Bonnet, O., Vignes, M., Biggs, P. J., Baldwin, S., & Thomson, S. (2024). Visual Integration of Genome-Wide Association Studies and Differential Expression Results with the Hidecan R Package. Genes, 15(10). https://doi.org/10.3390/genes15101244
GWAS Software
Cite the appropriate GWAS software used for analysis:
GWASpoly
Rosyara, U. R., de Jong, W. S., Douches, D. S., & Endelman, J. B. (2016). Software for Genome‐Wide Association Studies in Autopolyploids and Its Application to Potato. The Plant Genome, 9(2). https://doi.org/10.3835/plantgenome2015.08.0073
Reporting HIDECAN Results
When publishing association studies visualized with HIDECAN:
Methods Section:
1. VIEWpoly and HIDECAN citations
2. GWAS software and version
3. Statistical model used
4. Population structure correction method
5. Significance thresholds applied
6. Multiple testing correction
Additional Resources
HIDECAN Documentation: https://plantandfoodresearch.github.io/hidecan/
GWASpoly Tutorial: https://potatobreeding.cals.wisc.edu/software/
VIEWpoly Tutorial: https://cristianetaniguti.github.io/viewpoly_vignettes/
Tools for Polyploids: https://www.polyploids.org/
Try the viewpoly package in your browser
Any scripts or data that you put into this service are public.
viewpoly documentation built on July 11, 2026, 1:08 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
HIDECAN - How to Cite
VIEWpoly Citation
Taniguti, C. H., de Siqueira Gesteira, G., Lau, J., da Silva Pereira, G., Zeng, Z.-B., Byrne, D., Riera-Lizarazu, O., & Mollinari, M. (2022). VIEWpoly: a visualization tool to integrate and explore results of polyploid genetic analysis. Journal of Open Source Software, 7(74), 4242. https://doi.org/10.21105/joss.04242
HIDECAN Citation
Angelin-Bonnet, O., Vignes, M., Biggs, P. J., Baldwin, S., & Thomson, S. (2024). Visual Integration of Genome-Wide Association Studies and Differential Expression Results with the Hidecan R Package. Genes, 15(10). https://doi.org/10.3390/genes15101244
GWAS Software
Cite the appropriate GWAS software used for analysis:
GWASpoly
Rosyara, U. R., de Jong, W. S., Douches, D. S., & Endelman, J. B. (2016). Software for Genome‐Wide Association Studies in Autopolyploids and Its Application to Potato. The Plant Genome, 9(2). https://doi.org/10.3835/plantgenome2015.08.0073
Reporting HIDECAN Results
When publishing association studies visualized with HIDECAN:
Methods Section: 1. VIEWpoly and HIDECAN citations 2. GWAS software and version 3. Statistical model used 4. Population structure correction method 5. Significance thresholds applied 6. Multiple testing correction
Additional Resources
HIDECAN Documentation: https://plantandfoodresearch.github.io/hidecan/
GWASpoly Tutorial: https://potatobreeding.cals.wisc.edu/software/
VIEWpoly Tutorial: https://cristianetaniguti.github.io/viewpoly_vignettes/
Tools for Polyploids: https://www.polyploids.org/
Try the viewpoly package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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