mfishtools: mfishtools: Building Gene Sets and Mapping mFISH Data.
In AllenInstitute/mfishtools: Building Gene Sets and Mapping mFISH Data
mfishtools R Documentation
mfishtools: Building Gene Sets and Mapping mFISH Data.
Description
This repository includes code for gene selection for spatial transcriptomics methods and for
mapping of spatial transcriptomics (or RNA-Seq data) onto a RNA-Seq reference. Specific topics include:
1) Correlation-based mapping of cells to reference cell types
2) Iterative building of gene panels a greedy algorithm with pre-defined constraints
3) Visualizations related to gene mapping a gene panel selection
AllenInstitute/mfishtools documentation built on July 5, 2023, 4:20 p.m.
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| mfishtools | R Documentation |
mfishtools: Building Gene Sets and Mapping mFISH Data.
Description
This repository includes code for gene selection for spatial transcriptomics methods and for mapping of spatial transcriptomics (or RNA-Seq data) onto a RNA-Seq reference. Specific topics include: 1) Correlation-based mapping of cells to reference cell types 2) Iterative building of gene panels a greedy algorithm with pre-defined constraints 3) Visualizations related to gene mapping a gene panel selection
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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