plotNodes: Plot dendrogram

In AllenInstitute/mfishtools: Building Gene Sets and Mapping mFISH Data

Plot dendrogram

Description

Plots a dendrogram with set not colors, shapes, sizes and labels. This is a wrapper for plot.

Usage

plotNodes(
  tree,
  value = rep(1, length(labels(tree))),
  cexScale = 2,
  margins = c(10, 5, 2, 2),
  cols = "black",
  pch = 19,
  ...
)

Arguments

tree	a dendrogram object
value	numeric vector corresponding to the size of each node
cexScale	a global cex multiplier for node sizes
margins	set the margins using par(mar=margins)
cols	vector of node colors (or a single value)
pch	vector of node pch shapes (or a single value)
...	additional parameters for the plot function

AllenInstitute/mfishtools documentation built on July 5, 2023, 4:20 p.m.