getDend: Build a dendrogram from gene panel

In AllenInstitute/mfishtools: Building Gene Sets and Mapping mFISH Data

Build a dendrogram from gene panel

Description

Build a dendrogram from an inputted data matrix.

Usage

getDend(dat, distFun = function(x) return(as.dist(1 - WGCNA::cor(x))), ...)

Arguments

dat	matrix of values (e.g., genes x clusters) for calculating the dendrogram
distFun	function for calculating distance matrix (default is correlation-based)
...	additional variables for distFun

Value

dendrogram

AllenInstitute/mfishtools documentation built on July 5, 2023, 4:20 p.m.