View source: R/markerGenesAndMapping.r
makeLCAtable | R Documentation |
Calculates the vector for lowest common ancestor for every pair of leaves in a tree and returns a vector in a specific format for faster look-up.
makeLCAtable(dend, includeInternalNodes = FALSE, verbose = FALSE)
dend |
a cluster dendrogram |
includeInternalNodes |
should internal nodes be included in the output? |
verbose |
if TRUE, status will be printed to the screen, since function is relatively slow for large trees (default FALSE) |
The function will return a vector for lowest common ancestor for every pair of leaves in dend. Vector names are l1|||l2 for string parsing in other functions.
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