outputTopConfused: Table of confused clusters
In AllenInstitute/mfishtools: Building Gene Sets and Mapping mFISH Data
View source: R/markerGenesAndMapping.r
outputTopConfused R Documentation
Table of confused clusters
Description
This function returns a table of the top confused clusters (assigned clusters
incorrectly mapped)
Usage
outputTopConfused(confusionProp, count = 10)
Arguments
confusionProp
confusion matrix (e.g., output from getConfusionMatrix).
count
number of top confusions to show
Value
a 3 x count matrix of the top confused pairs of clusters with the three
columns corresponding to mapped cluster, assigned cluster, and fraction of
cells incorrectly mapped, respectively.
AllenInstitute/mfishtools documentation built on July 5, 2023, 4:20 p.m.
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View source: R/markerGenesAndMapping.r
| outputTopConfused | R Documentation |
Table of confused clusters
Description
This function returns a table of the top confused clusters (assigned clusters incorrectly mapped)
Usage
outputTopConfused(confusionProp, count = 10)
Arguments
confusionProp |
confusion matrix (e.g., output from getConfusionMatrix). |
count |
number of top confusions to show |
Value
a 3 x count matrix of the top confused pairs of clusters with the three columns corresponding to mapped cluster, assigned cluster, and fraction of cells incorrectly mapped, respectively.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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