View source: R/markerGenesAndMapping.r
resolve_cl | R Documentation |
Returns the mapped cluster call of each cell to each leaf. This function is called by map_dend
resolve_cl(
cl.g,
cl.med,
markers,
dat,
map.dat,
select.cells,
p = 0.7,
low.th = 0.2
)
cl.g |
all clusters |
cl.med |
cluster medians |
markers |
gene markers |
dat |
normalized data of the REFERENCE data set |
map.dat |
normalized data of the MAPPING data set. Default is to map the data onto itself. |
select.cells |
which cells to use? |
p |
proportion of marker genes to include in each iteration of the mapping algorithm. |
low.th |
the minimum difference in Pearson correlation required to decide on which branch to map to. otherwise, a random branch is chosen. |
a vector of the mapped cluster
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