lca: Get lowest common ancestor (defined cluster pairs)
In AllenInstitute/mfishtools: Building Gene Sets and Mapping mFISH Data
View source: R/markerGenesAndMapping.r
lca R Documentation
Get lowest common ancestor (defined cluster pairs)
Description
Maps a cluster back up the tree to the first node where the mapped and correct clusters agree.
Usage
lca(dend, l1, l2, l = rep(attr(dend, "label"), length(l1)))
Arguments
dend
a cluster dendrogram
l1
a vector of node labels
l2
a second fector of node labels (of the same length as l1)
l
do not adjust; required for recursive function
Value
The function will return a vector for lowest common ancestor for every pair of nodes in l1 and l2
AllenInstitute/mfishtools documentation built on July 5, 2023, 4:20 p.m.
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View source: R/markerGenesAndMapping.r
| lca | R Documentation |
Get lowest common ancestor (defined cluster pairs)
Description
Maps a cluster back up the tree to the first node where the mapped and correct clusters agree.
Usage
lca(dend, l1, l2, l = rep(attr(dend, "label"), length(l1)))
Arguments
dend |
a cluster dendrogram |
l1 |
a vector of node labels |
l2 |
a second fector of node labels (of the same length as l1) |
l |
do not adjust; required for recursive function |
Value
The function will return a vector for lowest common ancestor for every pair of nodes in l1 and l2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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