typeToSeverity: Ranks the variant effects
In ChristofferFlensburg/superFreq: Calls and tracks CNAs, SNVs and clones over multiple cancer exomes.
typeToSeverity R Documentation
Ranks the variant effects
Description
Ranks the variant effects
Usage
typeToSeverity(type, annotationMethod = "VEP")
Arguments
type
character: The effect.
Details
Returns a low score for severe effects, higher for less severe, 100 for unknown. 11 and below alters the protein.
ChristofferFlensburg/superFreq documentation built on June 2, 2025, 10:28 a.m.
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| typeToSeverity | R Documentation |
Ranks the variant effects
Description
Ranks the variant effects
Usage
typeToSeverity(type, annotationMethod = "VEP")
Arguments
type |
character: The effect. |
Details
Returns a low score for severe effects, higher for less severe, 100 for unknown. 11 and below alters the protein.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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