export_data_from_seurat: Function to export data tables from Seurat object.

In FloWuenne/scFunctions: Functions for single cell data analysis

Description

This simple function will save the raw UMI matrix ([e-mail]), the normalized UMI matrix (seurat_object@data) and the metadata ([e-mail]) from the Seurat object into tab separated files.

Usage

export_data_from_seurat(seurat_object, output_dir = ".")

Arguments

seurat_object	The S4 Seurat object which contains filtered and normalized cells in the data slot.
output_dir	Directory where the data tables will be saved.

Examples

export_data_from_seurat()

FloWuenne/scFunctions documentation built on June 3, 2021, 6:42 p.m.