View source: R/plot_rrs_ranking.R
Calculates Regulon specificity score (RSS) from binary regulon activity.
1 2 3 4 5 6 7 8 | plot_rrs_ranking(
rrs_df,
cell_type,
ggrepel_force = 1,
ggrepel_point_padding = 0.2,
top_genes = 4,
plot_extended = FALSE
)
|
rrs_df |
Data frame containing RSS scores for all regulons over all cell types. Can be created with calculate_rrs. |
cell_type |
Cell type for which to plot jsd ranking. Select "all" to plot a facet plot over all cell types. |
ggrepel_force |
same as the force parameter for geom_text_repel. |
ggrepel_point_padding |
same as the force parameter for geom_text_repel. |
top_genes |
Number of top genes to label in plot using ggrepel. |
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