sra_submission: Prepare submission files for the NCBI sequence read archive...
In Gibbons-Lab/mbtools: Provides helper functions for microbiome preprocessing and analysis
sra_submission R Documentation
Prepare submission files for the NCBI sequence read archive (SRA).
Description
Prepare submission files for the NCBI sequence read archive (SRA).
Usage
sra_submission(object, ...)
Arguments
object
An experiment data table as returned by any alignment method
like align_short_reads or align_long_reads .
...
Configuration arguments or a configuration as generated by
config_sra.
Value
A list containing the used alignments and the transcript counts in
'counts'.
Gibbons-Lab/mbtools documentation built on Jan. 28, 2024, 11:08 a.m.
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| sra_submission | R Documentation |
Prepare submission files for the NCBI sequence read archive (SRA).
Description
Prepare submission files for the NCBI sequence read archive (SRA).
Usage
sra_submission(object, ...)
Arguments
object |
An experiment data table as returned by any alignment method
like |
... |
Configuration arguments or a configuration as generated by
|
Value
A list containing the used alignments and the transcript counts in 'counts'.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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