gprofiler_analysis: Create gprofiler gene ontology enrichment for a given dataset
In HCGB-IGTP/HCGB.IGTP.DAnalysis: Useful in-house functions for multiple analysis
View source: R/functional_functions.R
gprofiler_analysis R Documentation
Create gprofiler gene ontology enrichment for a given dataset
Description
Create gprofiler gene ontology enrichment for a given dataset
Usage
gprofiler_analysis(
genes_of_interest,
dir2save,
name2use,
significant_ = TRUE,
organism2use = "hsapiens"
)
Arguments
genes_of_interest
List of genes (ENSEMBL ids)
name2use
Name tag to add
significant_
Flag to show only significant (default) or any result ranked by pvalue
organism2use
Organism species name. Default: hsapiens
dirsave
Folder to store results
HCGB-IGTP/HCGB.IGTP.DAnalysis documentation built on April 13, 2025, 12:03 a.m.
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View source: R/functional_functions.R
| gprofiler_analysis | R Documentation |
Create gprofiler gene ontology enrichment for a given dataset
Description
Create gprofiler gene ontology enrichment for a given dataset
Usage
gprofiler_analysis(
genes_of_interest,
dir2save,
name2use,
significant_ = TRUE,
organism2use = "hsapiens"
)
Arguments
genes_of_interest |
List of genes (ENSEMBL ids) |
name2use |
Name tag to add |
significant_ |
Flag to show only significant (default) or any result ranked by pvalue |
organism2use |
Organism species name. Default: hsapiens |
dirsave |
Folder to store results |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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