plot_gene_values: Plot values per genes
In HCGB-IGTP/HCGB.IGTP.DAnalysis: Useful in-house functions for multiple analysis
View source: R/DESeq2_functions.R
plot_gene_values R Documentation
Plot values per genes
Description
Plot DESeq2 normalization values using ggplot2
Usage
plot_gene_values(
gene,
tableCounts,
targetsFile,
condition,
out_folder,
print2file = TRUE
)
Arguments
gene
Gene ID
tableCounts
Expression counts. Samples as columns
targetsFile
Phenothypic information. Sampes as rows.
condition
List of phenotypic condition to retrieve in targestFile
out_folder
Out folder to create plot
HCGB-IGTP/HCGB.IGTP.DAnalysis documentation built on April 13, 2025, 12:03 a.m.
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View source: R/DESeq2_functions.R
| plot_gene_values | R Documentation |
Plot values per genes
Description
Plot DESeq2 normalization values using ggplot2
Usage
plot_gene_values(
gene,
tableCounts,
targetsFile,
condition,
out_folder,
print2file = TRUE
)
Arguments
gene |
Gene ID |
tableCounts |
Expression counts. Samples as columns |
targetsFile |
Phenothypic information. Sampes as rows. |
condition |
List of phenotypic condition to retrieve in targestFile |
out_folder |
Out folder to create plot |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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