volcanoplot: Create Volcano plot
In HCGB-IGTP/HCGB.IGTP.DAnalysis: Useful in-house functions for multiple analysis
volcanoplot R Documentation
Create Volcano plot
Description
This functions creates volcano plots given a dataframe containing:
baseMean, log2FoldChange and padj header names.
Usage
volcanoplot(
res,
lfcthresh = 2,
sigthresh = 0.05,
main = "Volcano Plot",
legendpos = "topright",
textcx = 1,
...
)
Arguments
res
dataframe
lfcthresh
Log fold change threshold
sigthresh
pvalue adjusted threshold
main
Main plot legend
legendpos
Legend position
HCGB-IGTP/HCGB.IGTP.DAnalysis documentation built on April 13, 2025, 12:03 a.m.
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| volcanoplot | R Documentation |
Create Volcano plot
Description
This functions creates volcano plots given a dataframe containing: baseMean, log2FoldChange and padj header names.
Usage
volcanoplot(
res,
lfcthresh = 2,
sigthresh = 0.05,
main = "Volcano Plot",
legendpos = "topright",
textcx = 1,
...
)
Arguments
res |
dataframe |
lfcthresh |
Log fold change threshold |
sigthresh |
pvalue adjusted threshold |
main |
Main plot legend |
legendpos |
Legend position |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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