API for HuntsmanCancerInstitute/hciR
RNA-seq workflows at HCI

Global functions
%>%	Man page
annotate_results	Man page Source code
as_matrix	Man page Source code
as_tbl	Man page Source code
check_contrasts	Man page Source code
deseq_from_tibble	Man page Source code
drop_empty_columns	Man page Source code
extract_samples	Man page Source code
fgsea_all	Man page Source code
filter_counts	Man page Source code
filter_top_counts	Man page Source code
gdc_coldata	Man page Source code
gdc_rowdata	Man page Source code
gene_intersect	Man page Source code
order_samples	Man page Source code
palette255	Man page Source code
pasilla	Man page
plot_biotypes	Man page Source code
plot_counts	Man page Source code
plot_dist	Man page Source code
plot_fgsea	Man page Source code
plot_filter	Man page Source code
plot_genes	Man page Source code
plot_interactions	Man page Source code
plot_ma	Man page Source code
plot_pca	Man page Source code
plot_volcano	Man page Source code
print_genes	Man page Source code
r_log	Man page Source code
read_RSEM	Man page Source code
read_RnaSeqMetrics	Man page Source code
read_STAR	Man page Source code
read_biomart	Man page Source code
read_deseq	Man page Source code
read_featureCounts	Man page Source code
read_gsea	Man page Source code
read_gsea_file	Man page Source code
read_idxstats	Man page Source code
read_ipa	Man page Source code
read_sample_files	Man page Source code
reexports	Man page
results2	Man page Source code
results_all	Man page Source code
results_apeglm	Man page Source code
sort_counts	Man page Source code
sort_samples	Man page Source code
summary_deseq	Man page Source code
summary_tibble	Man page Source code
top3	Man page Source code
top_counts	Man page Source code
top_genes	Man page Source code
write_deseq	Man page Source code
write_gsea_rnk	Man page Source code
write_ipa	Man page Source code