plot_filter: Plot count matrix to check filter cutoff
In HuntsmanCancerInstitute/hciR: RNA-seq workflows at HCI
plot_filter R Documentation
Plot count matrix to check filter cutoff
Description
Plot the total number of features removed from count matrix using different
low count cutoffs for both maximum and total reads
Usage
plot_filter(x, n = 20)
Arguments
x
count matrix, data.frame or tibble
n
maximum cutoff, default is to display 0 to 20
Value
A plot
Author(s)
Chris Stubben
Examples
## Not run:
plot_filter(counts)
## End(Not run)
HuntsmanCancerInstitute/hciR documentation built on Aug. 20, 2024, 12:22 a.m.
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| plot_filter | R Documentation |
Plot count matrix to check filter cutoff
Description
Plot the total number of features removed from count matrix using different low count cutoffs for both maximum and total reads
Usage
plot_filter(x, n = 20)
Arguments
x |
count matrix, data.frame or tibble |
n |
maximum cutoff, default is to display 0 to 20 |
Value
A plot
Author(s)
Chris Stubben
Examples
## Not run:
plot_filter(counts)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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