annotate_results: Annotate DESeq2 results

View source: R/annotate_results.R

annotate_resultsR Documentation

Annotate DESeq2 results

Description

Add BioMart annotations to a DESeq2 result table

Usage

annotate_results(result, biomart, add, id = 1)

Arguments

result

a DESeqResults object with Ensembl IDs as row names

biomart

annotations from read_biomart with id column matching row names in results

add

a vector of biomart columns to add to result table, default gene_name, biotype and description

id

position or name of column in biomart that matches rows names in the DESeq results

Value

A tibble

Author(s)

Chris Stubben

Examples

## Not run: 
 annotate_results(res, human98)

## End(Not run)

HuntsmanCancerInstitute/hciR documentation built on March 26, 2024, 3:09 a.m.