extract_samples: Parse sample from file names
In HuntsmanCancerInstitute/hciR: RNA-seq workflows at HCI
View source: R/extract_samples.R
extract_samples R Documentation
Parse sample from file names
Description
Sample names are parsed from file names without the extension. If the file name is not unique,
the parent directory is used.
Usage
extract_samples(files)
Arguments
files
file name with path
Value
A vector
Author(s)
Chris Stubben
Examples
# File name or parent directory should be unique
extract_samples(c("align1/1355X1.counts", "align2/1355X2.counts"))
extract_samples(c("align1/1355X1/Log.out", "align2/1355X2/Log.out"))
HuntsmanCancerInstitute/hciR documentation built on March 26, 2024, 3:09 a.m.
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View source: R/extract_samples.R
| extract_samples | R Documentation |
Parse sample from file names
Description
Sample names are parsed from file names without the extension. If the file name is not unique, the parent directory is used.
Usage
extract_samples(files)
Arguments
files |
file name with path |
Value
A vector
Author(s)
Chris Stubben
Examples
# File name or parent directory should be unique
extract_samples(c("align1/1355X1.counts", "align2/1355X2.counts"))
extract_samples(c("align1/1355X1/Log.out", "align2/1355X2/Log.out"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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