print_genes: Print the scaled values from plot_genes and optionally add...

In HuntsmanCancerInstitute/hciR: RNA-seq workflows at HCI

Print the scaled values from plot_genes and optionally add branches from cutree

Description

Print the scaled values from plot_genes and optionally add branches from cutree

Usage

print_genes(x, cut)

Arguments

x	a tibble from top_counts
cut	number of branches to cut

Value

tibble with id, branch and rlog values used by plot_genes

Author(s)

Chris Stubben

Examples

x <- top_counts(pasilla$results, pasilla$rlog)
plot_genes(x, c("condition", "type"), scale="row", annotation_names_col=FALSE)
print_genes(x, cut=5)

HuntsmanCancerInstitute/hciR documentation built on Aug. 20, 2024, 12:22 a.m.