Get_BASIC_drawing: To get basic drawing, including t-SNE, split figure and...

In Lian-Lab/LIANLAB: To integrate analysis methods and simplify analysis process

Description

To get basic drawing, including t-SNE, split figure and featureplot

Usage

Get_BASIC_drawing(
  object,
  filename = NULL,
  genenames,
  pt.size = 0.6,
  split_by = "samples",
  width = 7,
  height = 6,
  ncol = 2
)

Arguments

object	seurat.obj
filename	the name of the generated file
genenames	the genes you interested
pt.size	size of the point
split_by	split the figure by
width	the width of the figure
height	the height of the figure
ncol	the col of the figure

Examples

## Not run: 
input.file <- system.file('extdata','pbmc_small.RDS',package = 'LIANLAB')
load(input.file)
Get_BASIC_drawing(pbmc_small,genenames=c('CD8A','CD4'))

## End(Not run)

Lian-Lab/LIANLAB documentation built on June 23, 2021, 5:37 a.m.