Get_singleR: Title
In Lian-Lab/LIANLAB: To integrate analysis methods and simplify analysis process
Description
Usage
Arguments
Value
Examples
Description
Title
Usage
1
Get_singleR(seurat.obj, species = c("m", "h"), types = c("main", "fine"))
Arguments
seurat.obj
seurat.obj
species
the species of the seurat.obj
types
the types of annotation, 'main' or 'fine'
Value
the seurat,obj including the celltype annotation
Examples
1
2
3
4
5
6
## Not run:
input.file <- system.file('extdata','pbmc_1k.RDS',package = 'LIANLABDATA')
pbmc_1k <- readRDS(input.file)
seurat.obj <- Get_singleR( pbmc_1K, species = 'h',types = 'main')
## End(Not run)
Lian-Lab/LIANLAB documentation built on June 23, 2021, 5:37 a.m.
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Description Usage Arguments Value Examples
Description
Title
Usage
1 | Get_singleR(seurat.obj, species = c("m", "h"), types = c("main", "fine"))
|
Arguments
seurat.obj |
seurat.obj |
species |
the species of the seurat.obj |
types |
the types of annotation, 'main' or 'fine' |
Value
the seurat,obj including the celltype annotation
Examples
1 2 3 4 5 6 | ## Not run:
input.file <- system.file('extdata','pbmc_1k.RDS',package = 'LIANLABDATA')
pbmc_1k <- readRDS(input.file)
seurat.obj <- Get_singleR( pbmc_1K, species = 'h',types = 'main')
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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