Get_GK_genes: Integrated GO/KEGG pathways gene
In Lian-Lab/LIANLAB: To integrate analysis methods and simplify analysis process
Description
Usage
Arguments
Value
Examples
Description
Integrated GO/KEGG pathways gene
Usage
1
Get_GK_genes(DATA, keyword = NULL)
Arguments
DATA
the GO/KEGG result, including cols named geneID and Description
keyword
the keywood of the pathways you interested
Value
the genes in the pathways you choose
Examples
1
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## Not run:
input.file <- system.file('extdata','GO_enrich.csv',package = 'LIANLAB')
markers <- read.csv(input.file,header = T, row.names = 1)
Get_GK_genes(markers)
Get_GK_genes(markers, keyword = c('DNA'))
## End(Not run)
Lian-Lab/LIANLAB documentation built on June 23, 2021, 5:37 a.m.
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Description Usage Arguments Value Examples
Description
Integrated GO/KEGG pathways gene
Usage
1 | Get_GK_genes(DATA, keyword = NULL)
|
Arguments
DATA |
the GO/KEGG result, including cols named geneID and Description |
keyword |
the keywood of the pathways you interested |
Value
the genes in the pathways you choose
Examples
1 2 3 4 5 6 7 | ## Not run:
input.file <- system.file('extdata','GO_enrich.csv',package = 'LIANLAB')
markers <- read.csv(input.file,header = T, row.names = 1)
Get_GK_genes(markers)
Get_GK_genes(markers, keyword = c('DNA'))
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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