Bed2Granges: Read a bed file as Genomic Ranges
In ManchesterBioinference/Motif2Site: Detect binding sites from motifs and ChIP-seq experiments, and compare binding sites across conditions
Description
Usage
Arguments
Value
Examples
Description
Read a bed file as Genomic Ranges.
Usage
1
Bed2Granges(fileName)
Arguments
fileName
A table delimeted file in bed format
Value
granges format of given coordinates
Examples
1
2
3
4
yeastExampleFile=system.file("extdata", "YeastSampleMotif.bed",
package="Motif2Site")
ex <- Bed2Granges(yeastExampleFile)
ex
ManchesterBioinference/Motif2Site documentation built on Feb. 13, 2022, 2:03 a.m.
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Description Usage Arguments Value Examples
Description
Read a bed file as Genomic Ranges.
Usage
1 | Bed2Granges(fileName)
|
Arguments
fileName |
A table delimeted file in bed format |
Value
granges format of given coordinates
Examples
1 2 3 4 | yeastExampleFile=system.file("extdata", "YeastSampleMotif.bed",
package="Motif2Site")
ex <- Bed2Granges(yeastExampleFile)
ex
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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