CompareBeds2GivenRegions: Compare a set of bed files to a provided regions set
In ManchesterBioinference/Motif2Site: Detect binding sites from motifs and ChIP-seq experiments, and compare binding sites across conditions
Description
Usage
Arguments
Value
Description
Get combined ranges of bed files and compare them to given
binding regions in terms of precision/recall.
Usage
1
CompareBeds2GivenRegions(motifName, bindingRegions)
Arguments
motifName
a vector of motif names
bindingRegions
granges of provided binding regions
Value
A dataframe which includes precision recall values for each motif
ManchesterBioinference/Motif2Site documentation built on Feb. 13, 2022, 2:03 a.m.
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Description Usage Arguments Value
Description
Get combined ranges of bed files and compare them to given
binding regions in terms of precision/recall.
Usage
1 | CompareBeds2GivenRegions(motifName, bindingRegions)
|
Arguments
motifName |
a vector of motif names |
bindingRegions |
granges of provided binding regions |
Value
A dataframe which includes precision recall values for each motif
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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