add.deeplc.rt: Adds DeepLC retention times to the predicted Prosit library

View source: R/AddDeepLcRt.R

add.deeplc.rtR Documentation

Adds DeepLC retention times to the predicted Prosit library

Description

Adds DeepLC retention times to the predicted Prosit library

Usage

add.deeplc.rt(inputLib, outputLib, calibLib, nCal, deepLcFolder)

Arguments

inputLib

path to spectral library that should have its retention times replaced.

outputLib

desired path to spectral library with replaced retention time.

calibLib

path to calibration library as created by the MSLibrarian package (.RData)

nCal

decimal number giving the proportion of calibration peptides in calibrationLib to use

deepLcFolder

path to folder with DeepLC result files


MarcIsak/MSLibrarian documentation built on Aug. 27, 2022, 4:55 a.m.